YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21955162, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPAWLGEL LVLLLFAASL DQVALATEVQ PPVTNLSVSV ENLCTIVWTW SPPEGASPNC  60
   61 SLRYFSHFDD QQDKKIAPET RRKKELPLNE KICLQVGSQC STNESEKPSP LVKKCISPPR 120
  121 RGSESAVTEL QCTWHNLSYM KCSWLPGKNT SPDTNYTLYY WYSSLGKSLQ CENIHREGQH 180
  181 IGCSFKLTKV ESNYEHHNIQ IMVKDNAGKI RPSYKIVSFT SNVKPGPPHI KHLFLKNGAL 240
  241 FVQWKNPQNF SSRCLSYEVE VNSTQTDSYN SNSLEVEEDK CQNSEFDRNM EGASCFISPG 300
  301 VLANTVYTVR VRVKTNKLCF DDNDLWSNWS EALSIGKEPN STFYTTMLLI IPVFVAVVII 360
  361 ILLFYLKRLK IIIFPPIPDP GKIFKEMFGD QNDDTLHWKK YDIYEKQSKE ETDSVVLIEN 420
  421 LKKAAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle