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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASIC5_RAT
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHTEKSKGP AEKGLLGKIR RYLSKRPLPS PTDRKKFDHD FAISTSFHGI HNIAQNQNKV  60
   61 RKVIWLSVVL GSVSLLVWQI YSRLVNYFMW PTTTSIEVQY VEKIEFPAVT FCNLNRFQTE 120
  121 AVSRFGIIFF LWDIVSKVLR LQEISGNNTG SPEALDFVAS HRNFSITEFV KNNGFYLNHD 180
  181 TLVHCEFFGK TCDPKDFKHV FTEYGNCFTF NYGENVQSKN KVSVSGRGLK LLLDVHQEEF 240
  241 TDNPVPGFAD AGVIFVIHSP KKEPQFDGLG LSSPVGMHAR VTIRQLKTIH QEYPWGECNP 300
  301 DIKLRNFTTY STYGCLKECK AKHIQRLCGC LPFLLPGNGV ECDLLKYYNC VSPILDHIER 360
  361 KGLCTMGTHN SSCPVPCEET EYPATIAYST FPSQRATKFL AKKLNQSQEY IRENLVNIEI 420
  421 NYSDLNYKIT QQQKAVSVPE LLADVGGQLG LFCGASLITI IEIIEYLFTS FYWVFIFFLL 480
  481 KILEMIQRTS PPQTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle