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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DSPP_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKIIIYIC IWATAWAIPV PQLVPLERDI VEKSADVPFL AHPGTAAQNE LHINNATNDD  60
   61 SPKGSELGRQ VHSNGGYERD RNGSESIAVG GKSSPTQPIL ANAQGNSAKE REDVETYGHD 120
  121 GIHAGGENST ANGIRGQVGI AENAEEAKES KVHGQPHQDT KTGLASDTSQ NGDATLVQEN 180
  181 EPQVAGSKNS TNHEVGTHGS GVAAQETTPQ REGEGSENQG AEVTPSIGEG AGLDNTEGSP 240
  241 SGNGIEEDED TGSGDGVGAD AGDGRESHDG TEGHEGQSSG GNNDNRGQGS VSTEDDDSKE 300
  301 QEGSPNGRGG DNTSSSEETG IEEGDGTQTT QDNQNLSPTE GGIISQAEAC PSGQSQNQGL 360
  361 ETEGSSTGNK SSITKESGKL SGSKDSNGHH GMELDKRNSP KQGESDKPQG AAEKSDTHNN 420
  421 MGHSRIGSSS NSDGHDSYDF DDESMQGDDP NSSDESNGSD GSDDANSESA IENGNHGDAS 480
  481 YTSDESSDNG SDSDSHAGED DSSDDTSDTD DSDSNGDDDS ESKDKDESDN SNHDNDSDSE 540
  541 SKSDSSDSDS DSSDSSDSSD SSDSSETSDS SDSSDTSDSS DSSDSSDSSN SSDTSDSSDS 600
  601 SDGDSSDGDS SDSDSSDSDS SNSSDSDSSD SSDSSSSDSS DSDSDSKDST SDSSDDNSKS 660
  661 GNGNSDSDSD SDSDSEGSDS NHSTSDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle