YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP4F6_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLSLSRLG MGSLTASPWH LLLLGGASWI LARILAWIYT FYDNCCRLRC FPQPPKPSWF  60
   61 WGHLTLMKNN EEGMQFIAHL GRNFRDIHLS WVGPVYPILR LVHPNVIAPL LQASAAVAPK 120
  121 EMTLYGFLKP WLGDGLLMSA GEKWNHHRRL LTPAFHFDIL KSYVKIFNKS VNTMHAKWQR 180
  181 LTAKGSARLD MFEHISLMTL DSLQKCIFSF DSNCQESNSE YIAAILELSS LIVKRQRQPF 240
  241 LYLDFLYYLT ADGRRFRKAC DVVHNFTDAV IRERRSTLNT QGVDEFLKAR AKTKTLDFID 300
  301 VLLLAKDEHG KGLSDVDIRA EADTFMFGGH DTTASALSWI LYNLARHPEY QERCRQEVRE 360
  361 LLRDREPEEI EWDDLAQLPF LTMCIKESLR LHPPVLLISR CCSQDIVLPD GRVIPKGNIC 420
  421 VISIFGVHHN PSVWPDPEVY NPFRFDPENP QKRSPLAFIP FSAGPRNCIG QTFAMSEIKV 480
  481 ALALTLLRFC VLPDDKEPRR KPELILRAEG GLWLRVEPLS TVTSQLPWDL LAHPPTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle