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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP4F4_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLDLSWLG LRLETSLPWL LLLLIGASWL LVRVLTQTYI FYRTYQHLCD FPQPPKWNWF  60
   61 LGHLGMITPT EQGLKQVTKL VATYPQGFMT WLGPILPIIT LCHPDVIRSV LSASASVALK 120
  121 EVIFYSFLKP WLGDGLLLSD GDKWSCHRRM LTPAFHFNIL KPYVKIFNDS TNIMHAKWQD 180
  181 LASGGSARLD MFKNISLMTL DSLQKCVFSF DSNCQEKPSE YISAILELSA LVAKRYQQLL 240
  241 LHTDSLYQLT HNGRRFHKAC KLVHNFTDAV IQGRRRALPS QHEDDILKAK ARSKTLDFID 300
  301 VLLLTKDEDG KELSDEDIRA EADTFMFEGH DTTASGLSWI LYNLARHPEY QERCRQEVRE 360
  361 LLRDRESTEI EWDDLAQLPF LTMCIKESLR LHPPVTVISR RCTQDIVLPD GRVIPKGVIC 420
  421 IINIFATHHN PTVWPDPEVY DPFRFDPENI KDRSPLAFIP FSAGPRNCIG QTFAMNEMKV 480
  481 ALALTLLRFR VLPDDKEPRR KPELILRAEG GLWLRVEPLS TQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle