YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GOSR2_RAT, GS27_RAT
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLYQQTHK QVHEIQSHMG RLETADKQSV HLVENEIQAS IDQIFSHLER LEILSSKEPP  60
   61 NRRQNAKLRV DQLKYDVQHL QTALRNFQHR RQAKEQQERQ RDELLSRTFT TNDYDTTIPM 120
  121 DESLQFNSSL QNIHHGMDDL IGGGHSILEG LRAQRLTLKG TQKKILDIAN MLGLSNTVMR 180
  181 LIEKRALEDK YFMIGGMLLT CAVMFLVVQY LT

Type	Start	End	Confidence
Cytoplasmic	1	189	0.93
Transmembrane Helix	190	211	0.89
Non-Cytoplasmic	212	212	0.96