YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62649145, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLLFLQLIV LLPLGKAGLC VDDCQSQGSF SFALPERGRR DLHMVNHEEA EDKPDLFVAV  60
   61 PHLMGTSSAR EGQRQREKML SRLGRFWKKP EAELYPTRDM ESDHVLSGIQ ALTQPADVRK 120
  121 LERSPLQEEA KKFWHRFMFR KGPASQGVIL PIKSHEVHWE TCRTVPFNQT IAHEDCQKVT 180
  181 VQNNLCFGKC GSIHFPGEGA HPHNFCSHCS PTKFTTTHLR LNCTSPTPVV KMVIQVEECQ 240
  241 CMVKTEHGEE RRLLAGSQDS FISGLPA

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	267	0.99