YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109511686, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSASSPAT AVNTSNASDH QPASASPPSG CPMHEGQRKG CPVTAAASDL TSESKAHSVP  60
   61 AHQDRAYEYV ECPVTGAAAK NKENLDPSNL MPPPNQTPSP DQPFALSTSR EESSIPRADS 120
  121 EKKWVYPSEQ MFWNAMLRKG WKWKDDDISQ KDMYNIIRIH NQNNEQAWKE ILKWEALHAH 180
  181 ECPCGPSLVR FGGKAREYSP RARIRSWMGY ELPFDRHDWI INRCGTEVRY VIDYYDGGEV 240
  241 NKDYQFTILD VRPAFDSFSA VWDRMKVAWW RWTS

Type	Start	End	Confidence
Signal Peptide	1	17	0.52
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	274	0.99