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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CR1L_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASSPLDPV GRLVAFCRGG VHLAVLLLFL SPSTLGQCPA PPLFPYAKPI NPTDESTFPV  60
   61 GTSLKYECRP GYIKRQFSIT CEVNSVWTSP QDVCIRKQCE TPLDPQNGIV HVNTDIRFGS 120
  121 SITYTCNEGY RLIGSSSAMC IISDQSVAWD AEAPICESIP CEIPPSIPNG DFFSPNREDF 180
  181 HYGMVVTYQC NTDARGKKLF NLVGEPSIHC TSIDGQVGVW SGPPPQCIEL NKCTPPHVEN 240
  241 AVIVSKNKSL FSLRDMVEFR CQDGFMMKGD SSVYCRSLNR WEPQLPSCFK VKSCGAFLGE 300
  301 LPNGHVFVPQ NLQLGAKVTF VCNTGYQLKG NSSSHCVLDG VESIWNSSVP VCEQVICKLP 360
  361 QDMSGFQKGL QMKKDYYYGD NVALECEDGY TLEGSSQSQC QSDASWDPPL PKCVSQVICK 420
  421 LPQDMSGFQK GLQMKKDYYY GDNVALECED GYTLEGSSQS QCQSDASWDP PLPKCVSRSN 480
  481 SGLIAGIFIG IIVLILFIIF SYWMIMKFKK RNSTNEKCKE VGIYLNSKED SCVQPQSLLT 540
  541 SQENNSTSSP ARNSLTQEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle