YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|459931
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVVLLTAAL LALSSAQGTD EEVNNAETSD VPADSEQQPV DSGSDPPSAD ADAENVQEGE  60
   61 SAPPANEEPP ATSGSEEEQQ QQEPTQAENQ EPPATSGSEE EQQQQEPTQA ENQEPPATSG 120
  121 SEEEQQQQQP TQAENQEPPA TSGSEEEQQQ QESTQAENQE PSDSAGEGQE TQPEEGNVES 180
  181 PPSSPENSQE QPQQTNPEEK PPAPKTQDEP QHDSGRPKKP LLPFIANLIP ERIRKLLARS 240
  241 PLGRRF

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	246	0.99