YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIMP1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPFASLASG ILLLLSLIAS SKACSCAPTH PQTAFCNSDL VIRAKFMGSP EIIETTLYQR  60
   61 YEIKMTKMLK GFDAVGNATG FRFAYTPAME SLCGYVHKSQ NRSEEFLIAG RLRNGNLHIT 120
  121 ACSFLVPWHN LSPAQQKAFV KTYSAGCGVC TVFPCSAIPC KLESDSHCLW TDQILMGSEK 180
  181 GYQSDHFACL PRNPDLCTWQ YLGVSMTRSL PLAKAEA

Type	Start	End	Confidence
Signal Peptide	1	26	0.95
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	217	0.99