YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRDX5_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLRFCVLG SIAGSVLRAS ATWTCVAGRA GRKGAGWECG GARSFSSAAV TMAPIKVGDT  60
   61 IPSVEVFEGE PGKKVNLAEL FKDKKGVLFG VPGAFTPGCS KTHLPGFVEQ AGALKAKGAQ 120
  121 VVACLSVNDA FVTAEWGRAH QAEGKVQLLA DPTGAFGKET DLLLDDSLVS LFGNRRLKRF 180
  181 SMVIDKGVVK ALNVEPDGTG LTCSLAPNIL SQL

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	213	0.99