YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53733512, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQQRQSTE RDLYRDTWVR YLGYANEVGE AFRSLVPKAV VWLSYGVSSS YVLADAIDKG  60
   61 KKAGEVPSPE AGRSTRMALA VVDTFVWQSL ASVAIPGFTI NRLCAASLYV LGTMTRWPLN 120
  121 VRKWTTTTLG LLAIPVIVHP IDRSVDFLLD SSLRKLYPSV GKPSTP

Type	Start	End	Confidence
Non-Cytoplasmic	1	89	0.51
Transmembrane Helix	90	111	0.41
Cytoplasmic	112	123	0.41
Transmembrane Helix	124	141	0.53
Non-Cytoplasmic	142	166	0.75