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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16758510, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKHPGERG LCGVHHSGGS SLITSGSSVD PEILSFSGLR DSKETAPNGT RCLKEHSDPK  60
   61 CTQPSNPAHW SDPSHGPPRG PGPPREGGYP DESETCSEES GVDQELSREN ETGYQEDGSP 120
  121 SFLPIPSACN CQGSPGVPEG TCSEEGDGSS SSFCHHCTSP ALGEDEELEE EYDDEEPLKF 180
  181 PSDFSRVSSG KKPPSRRQRH RFLTKEDVRD SGRRDPKAPG RHRLAEVRQI TPEGLGLWGV 240
  241 EGLCQLGQAG FWWLIELLVL VGEYVETCGY LIYACRKLKG SDLDLFRIWV GVWARRLGGW 300
  301 ARVMFQFLSQ SFFSVAGLFI RLLRVVGAFL LLALALFLGC LQLGWRFLVG LGDRLGWRGK 360
  361 AAWLFSWLDS PALHHFLTLL KDSRPWQQLV RVIQWGWLEL PWVKQRTQRQ GTANVPSGRY 420
  421 CQPEEEVARL LTMAGVPEDE LNPFHVLGVE ATASDIELKK AYRQLAVMVH PDKNHHPRAE 480
  481 EAFKVLRAAW DIVSNPERRK EYEMKRMAEN ELSRSVNEFL SKLQDDLKEA MNTMMCSRCQ 540
  541 GKHRRFEMDR EPKSARYCAE CNRLHPAEEG DFWAESSMLG LKITYFALMD GKVYDITEWA 600
  601 GCQRVGISPD THRVPYHISF GSRVPGTSGR QRATPESPPA DLQDFLSRIF QVPPGPMSNG 660
  661 NFFAAPHPGP GTTSTSRPNS SVPKGEAKPK RRKKVRRPFQ R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle