YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STC1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQNSAVILA LVISAAAAHE AEQNDSVSPR KSRVAAQNSA EVVRCLNSAL QVGCGAFACL  60
   61 ENSTCDTDGM YDICKSFLYS AAKFDTQGKA FVKESLKCIA NGITSKVFLA IRRCSTFQRM 120
  121 IAEVQEDCYS KLNVCSIAKR NPEAITEVIQ LPNHFSNRYY NRLVRSLLEC DEDTVSTIRD 180
  181 SLMEKIGPNM ASLFHILQTD HCAQTHPRAD FNRRRTNEPQ KLKVLLRNLR GEGDSPSHIK 240
  241 RTSQENA

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	247	0.99