YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14091679, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEARLMARD IIKTLLHDQV PQPAVVSGAP SMKEPVGVED VSPVRDLDFM RCLESRNQVA  60
   61 LRLACIGDEM DRCLRSPRLV QLPGIAMHRL AATYSQTGVR GIFRSLIGSL TNLRENIWSW 120
  121 RVFTPGAWVS PDQDPGQLFP MVLLVFLLLG GAWHLQLQ

Type	Start	End	Confidence
Cytoplasmic	1	135	0.67
Transmembrane Helix	136	157	0.87
Non-Cytoplasmic	158	158	0.42