YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5817642, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPSLIQSCS SGALLMLLMA NLFLWEKVSS APINASETTL NDLKDLFDNA TVISGKMAEL  60
   61 GFAMRKEFFS NSFSSDIFTN IILDLHKSKE NIIKAFNSCH TVPINFPETT EDIRMTSFEE 120
  121 FLKMILQTLL AWKDPLQHLV TELSALPGCP YSILSKAKAI EAKNKDLLEY IKRIISMVNP 180
  181 AIKENEDYPI WSDLDSLQAA DKEIQFFALY MFSFCLRSDL ESLDFLVNFL KCLLLYNDNV 240
  241 CYSGF

Type	Start	End	Confidence
Signal Peptide	1	30	0.91
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	245	0.99