YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SDR1_RAT, NPTN_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSSLPGAL ALSLLLVSGS LLPGPGAAQN EPRIVTSEEV IIRDSLLPVT LQCNLTSSSH  60
   61 TLMYSYWTKN GVELTATRKN ASNMEYRINK PRAEDSGEYH CVYHFVSAPK ANATIEVKAA 120
  121 PDITGHKRSE NKNEGQDAMM YCKSVGYPHP EWMWRKKENG VFEEISNSSG RFFIINKENY 180
  181 TELNIVNLQI TEDPGEYECN ATNSIGSASV STVLRVRSHL APLWPFLGIL AEIIILVVII 240
  241 VVYEKRKRPD EVPDDDEPAG PMKTNSTNNH KDKNLRQRNT N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle