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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYT10_RAT
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRKEDGVS SLCQKALHII TELCFAGQVE WDKCSGIFPA DRSGQGGGGT DISVSLLAVV  60
   61 VSFCGLALLV VSLFVFWKLC WPCWKSKLVA PNVSTLPQSI SSAPTEVFET EEKKEVEENE 120
  121 KPAPKAIEPA IKISHTSPDI PAEVQTALKE HLIKHARVQR QTTDPTSSSR HNSFRRHLPR 180
  181 QMNVSSVDFS MGTEPVLQRG ETRTSIGRIK PELYKQKSVD SEGNRKDDVK TCGKLNFALQ 240
  241 YDYENELLVV KIIKALDLPA KDFTGTSDPY VKIYLLPDRK KKFQTRVHRK TLNPLFDELF 300
  301 QFPVVYDQLS NRKLHFSIYD FDRFSRHDMI GEVILDNLFE VSDLSREATV WKDIHCATTE 360
  361 SIDLGEIMFS LCYLPTAGRM TLTVIKCRNL KAMDITGSSD PYVKVSLMCE GRRLKKRKTT 420
  421 TKKNTLNPVY NEAIIFDIPP ENVDQVSLCI AVMDYDRVGH NEVIGVCRTG LDAEGLGRDH 480
  481 WNEMLAYHRK PITHWHPLLE LPGRATSFDS QGSCSSPRPP STP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle