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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13992591
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNDADPMSES KEDQWMGVTV QSQGPGGKVV TCAHRYEKRQ HVNTKQESRD IFGRCYVLSQ  60
   61 NLRIEDDMDG GDWSFCDGRL RGHEKFGSCQ QGVAATFTKD FHYIVFGAPG TYNWKGIVRV 120
  121 EQKNNTFFDM NIFEDGPYEV GGETDHDESL VPVPANSYLG FSLDSGKGIV SKDDITFVSG 180
  181 APRANHSGAV VLLKRDMKSA HLLLEYIFDG EGLASSFGYD VAVVDLNADG WQDIVIGAPQ 240
  241 YFDRDGEVXG AVYVYINQQG RWSNVKPVRL NGTKDSMFGI AVKNIGDINQ DGYPDIAVGA 300
  301 PYDDLGKVFI YHGSPTGIIT KPTQVLEGTT PFFGYSIAGN MDLDRNSYPD VAVGSLSDSV 360
  361 TIFRSRPVIN ILKTITVTPS RIDLRQKSMC GSPSGICLKV KACFEYTAKP SGYNPPISIL 420
  421 GILEAEKERR KSGLSSRVQF RNQGSEPKYT QELTLNRQKQ RACMEETLWL QENIRDKLRP 480
  481 IPITASVEIQ EPSSRRRVNS LPEVLPILNS NEAKTVQTDV HFLKEGCGDD NVCNSNLKLE 540
  541 YKFGTREGNQ DKFSYLPIQK GIPELVLKDQ KDIALKITVT NGPSDPRNPR KDGDDAHEAK 600
  601 LIATFPDTLT YSAYRELRAF PEKQLSCVAN QNGSQADCEL GNPFKRNSSV TFYLILSTTE 660
  661 VTFDTTDLDI NLKLETTSNQ DNLAPITAKA KVVIELLLSV SGVAKPSQVY FGGTVVGEQA 720
  721 MKSEEEVGSL IEYEFRVINL GKPLKNLGTA TLNIQWPKEI SNGKWLLYLM KVESKGLEQV 780
  781 VCEPHNEINF LKLKESHNSR KKRELPEKQI DDSRKFSLFS ERKYQTLNCS VNVRCVNIRC 840
  841 PLRGLDSKAS LVLRSRLWNS TFLEEYSKLN YLDILVRASI DVTAAAQNIK LPHAGTQVRV 900
  901 TVFPSKTVAQ YSGIAWWIIL LAVLAGILML ALLVFLLWKC GFFKRNKKDH YDATYHKAEI 960
  961 HTQPSDKERL TSDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle