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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNB2_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKAPPGLN RKTSRSTLSL PPEPVDIIRS KTCSRRVKIN VGGLNHEVLW RTLDRLPRTR  60
   61 LGKLRDCNTH ESLLEVCDDY NLNENEYFFD RHPGAFTSIL NFYRTGKLHM MEEMCALSFG 120
  121 QELDYWGIDE IYLESCCQAR YHQKKEQMNE ELRREAETMR DGEGEEFDNT CCPEKRKKLW 180
  181 DLLEKPNSSV AAKILAIVSI LFIVLSTIAL SLNTLPELQE NDEFGQPSDN RKLAHVEAVC 240
  241 IAWFTMEYLL RFLSSPNKWK FFKGPLNVID LLAILPYYVT IFLTESNKSV LQFQNVRRVV 300
  301 QIFRIMRILR ILKLARHSTG LQSLGFTLRR SYNELGLLIL FLAMGIMIFS SLVFFAEKDE 360
  361 DATKFTSIPA SFWWATITMT TVGYGDIYPK TLLGKIVGGL CCIAGVLVIA LPIPIIVNNF 420
  421 SEFYKEQKRQ EKAIKRREAL ERAKRNGSIV SMNLKDAFAR SMELIDVAVE KAGESANIKD 480
  481 SVDDNHLSPS RWKWARKALS ETSSNKSYEN KYQEVSQKDS HEQLNNTSSS SPQHLSAQKL 540
  541 EMLYNEITKT QTHSHPNPDC QEQPERPSAY EEEIEMEEVV CPQEQLAVAQ TEVIVDMKST 600
  601 SSIDSFTSCA TDFTETERSP LPPPSASHLQ MKFPTDLPGM DEHQRVRAPP FLTLSRDKGP 660
  661 AAREAALDYA PIDITVNLDA GASHGPLQPD SASDSPKSSL KGSNPLKSRS LKVNFQENRG 720
  721 SAPQTPPSTA RPLPVTTADF PLTTPQHMST ILLEESPPPG TETLPGADVS AHCQGPSKGL 780
  781 SPRVPKQKLF PFSSRERRSF TEIDTGEDED FLDLQRPRPD KQADPSPNCL ADKPGEARDP 840
  841 LREEGCVGSS SPQNTDHNCR QDIYQAVGEV KKDSSQEGYK MENHLFAPEI HSNPGDTGYC 900
  901 PTRETSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle