YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|423653, gi\|19...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEENEYSGYW EPPRRRCCCA RRGTQLVLVG LLTTVMVWLL ALLLLWHWET EKSLKQLGDA  60
   61 AIQNALQMSQ NLEELQAEQK QMKSQDSQLS QNLNELQEDL INVKSQNSEL SQNLNTLQED 120
  121 LVNVKSQGLN EKRAASDSLE KLQEEVAKLW IEILMSKGTA CNVCPKDWLH FQQKCYYFGE 180
  181 GSKQWIQAKF TCSDLEGRLV SIHSQKEQDF LMQHINKKES WIGLQDLNME GEFVWPDGSP 240
  241 VGYSNWNPGE PNNGGQGEDC VMMRGSGQWN DAFCRSYLDA WVCEQLATCD LSAPLASVTP 300
  301 TGPTPKNEP

Type	Start	End	Confidence
Cytoplasmic	1	23	0.97
Transmembrane Helix	24	48	0.91
Non-Cytoplasmic	49	309	0.99