YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BST1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQACALSL RLGLWMSLLL PVLPGAGARA AGARWSGEGT TPHLQSIFLG RCAEYTTLLS  60
   61 LEPGNKNCTA IWEAFKVVLD KDPCSVLPSD YDLFINLSRH AIPRDKSLFW ENNHLLVMSY 120
  121 AENTRRLMPL CDVLYGKVGD FLSWCRQENA SGLDYQSCPT AEDCENNAVD AYWKSASMQY 180
  181 SRDSSGVINV MLNGSEPKGA YPTKGFFADF EIPYLQKDKI TRIEIWVMHE VGGPHVESCG 240
  241 EGSVKILEDR LEALGFQHSC INDYPPVKFL MCVDHSTHPD CAMNSASASM WRESPALHAI 300
  301 GDISLIISLL VALASSSQA

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	319	0.96