YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7592833
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.72
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGLRGLPR RGLWLLLVHH LFMVTACRDP DYGTLIQELC LSRFKEDMET IGKTLWCDWG  60
   61 KTIGSYGELT HCTKLVANKI GCFWPNPEVD KFFIAVHHRY FSKCPVSGRA LRDPPNSILC 120
  121 PFIVLPITVT LLMTALVVWR SKRTEGIV

Type	Start	End	Confidence
Signal Peptide	1	26	0.86
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	117	0.94
Transmembrane Helix	118	139	0.80
Cytoplasmic	140	148	0.75