YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109479133, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVASVAAAL LAALGGALWL AARRFSGSSG QRRQGGGDPG LMHGKTVLIT GANSGLGRAT  60
   61 AGELLRLGAR VIMGCRDRAR AEEAAGQLRQ ELGQAGGLGP DATDGQLVVK ELDLASLRSV 120
  121 RAFCQELLQE EPRLDVLINN AGVFQCPYTK TEDGFEMQFG VNHLGHFLLT NLLLGLLKSS 180
  181 APSRIVVVSS KLYKYGDINF EDLNSEQSYN KSFCYSRSKL ANILFTRELA HRLEGTNVTV 240
  241 NVLHPGIVRT NLGRHIHIPL LARPLFNLVS WAFFKTPLEG AQTSIYLASS PDVEGVSGRY 300
  301 FGDCKEEELL PKAMDESVAR KLWDISEVMV GILK

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	334	0.98