YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5305193, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKELILLGLY LLGSSRGAPP GQPDELLDSV DQASVQQLSS EYFSLANPSD AKALYETASS  60
   61 EKTLSGHSSS EHESSEHTVT EHSAGEHSSG EQSSEHISSE HMSGEHLSEH TSGEHASTEH 120
  121 TSGEHTSGEH TSSEQLTTEQ SSSDQSSDVS SGEQVSGEKL EEAGEQVSGE DKGNEVISTP 180
  181 LPSTSSGGII NCHTCAYMNE DAKCLRGEGI CTTQNSQQCM LKKIYEGGKL QFMVQGCENM 240
  241 CPSMNLFSHG TRMQIMCCRH EALCNKA

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	267	0.99