YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TX101_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGACRIQYIL LVFLLIASHW TLVQNIYCEV SRTLSLEDNP SGTFNWTSKA EKCNPGEFCQ  60
   61 ETVLLIKAEG TKTAILASKS CVPQGAETMT FVQYTAPPGL VAISYSNYCN DSLCNNRNNL 120
  121 ASILQAPEPT ATSNMSGARH CPTCLALEPC SSAPSMPCAN GTTQCYHGKI ELSGGGMDSV 180
  181 VHVKGCTTAI GCRLMAKMES VGPMTVKETC SYQSFLHPRM AEIGASWMPT SLWVLELLLP 240
  241 ALSLPLIYFP

Type	Start	End	Confidence
Signal Peptide	1	23	0.62
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	250	0.75