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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7339684, gi|9...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGYTMLRNG GVGNGGQTCM LRWSNRIRLT WLSFTLFIIL VFFPLIAHYY LTTLDEADEA  60
   61 GKRIFGPRAG NELCEVKHVL DLCRIRESVS EELLQLEAKR QELNSEIAKL NLKIEACKKS 120
  121 IENAKQDLLQ LKNVISQTEH SYKELMAQNQ PKLSLPIRLL PEKDDAGLPP PKVTRGCRLH 180
  181 NCFDYSRCPL TSGFPVFVYD SDQFAFGSYL DPLVKQAFQA TVRANVYVTE NAAIACLYVV 240
  241 LVGEIQEPAV LQPADLEKQL HSLPHWRTDG HNHVIINLSR KSDTQNLLYN VSTGRAMVAQ 300
  301 STFYAAQYRA GFDLVVSPLV HAMSEPNFME IPPQVPVKRK YLFTFQGEKI ESLRSSLQEA 360
  361 RSFEEEMEGD PPADYDDRII ATLKAVQDSK LDQVLVEFTC KNQPKPSLPT EWALCGERED 420
  421 RLELLKLSTF ALIITPGDPS LLISSGCATR LFEALEVGAV PVVLGEQVQL PYHDMLQWNE 480
  481 AALVVPKPRV TEVHFLLRSL SDSDLLAMRR QGRFLWETYF STADSIFNTV LAMIRTRIQI 540
  541 PAAPIREEVA AEIPHRSGKA AGTDPNMADN GDLDLGPVET EPPYASPKYL RNFTLTVTDC 600
  601 YRSWNSAPGP FHLFPHTPFD PVLPSEAKFL GSGTGFRPIG GGAGGSGKEF QAALGGNVQR 660
  661 EQFTVVMLTY EREEVLMNSL ERLNGLPYLN KVVVVWNSPK LPSEDLLWPD IGVPIMVVRT 720
  721 EKNSLNNRFL PWNEIETEAI LSIDDDAHLR HDEIMFGFRV WREARDRIVG FPGRYHAWDI 780
  781 PHQSWLYNSN YSCELSMVLT GAAFFHKYYA YLYSYVMPQA IRDMVDEYIN CEDIAMNFLV 840
  841 SHITRKPPIK VTSRWTFRCP GCPQALSHDD SHFHERHKCI NFFVKVYGYM PLLYTQFRVD 900
  901 SVLFKTRLPH DKTKCFKFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle