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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPC2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVRPLLLL LLPLCPGPGP GHGSEAKVVR SCAETRQVLG ARGYSLNLIP PSLISGEHLQ  60
   61 ICPQEYTCCS SETEQKLIRD AEVTFRGLVE DSGSFLIHTL AARHRKFNEF FREMLSISQH 120
  121 SLAQLFSHSY GRLYSQHAVI FNSLFSGLRD YYEKSGEGLD DTLADFWAQL LERAFPLLHP 180
  181 QYSFPPDFLL CLTRLTSTAD GSLQPFGDSP RRLRLQITRA LVAARALVQG LETGRNVVSE 240
  241 ALKVPMLEGC RQALMRLIGC PLCRGVPSLM PCRGFCLNVA HGCLSSRGLE PEWGGYLDGL 300
  301 LLLAEKLQGP FSFELAAESI GVKISEGLMH LQENSVKVSA KVFQECGTPH PVQSRNRRAP 360
  361 APREETSRSW RSSAEEERPT TAAGTNLHRL VWELRERLSR VRGFWAGLPV TVCGDSRMAA 420
  421 DLSQEAAPCW TGVGRGRYMS PVVVGSLNEQ LHNPELDTSS PDVPTRRRRL HLRAATARMK 480
  481 AAALGQDLDM HDADEDASGS GGGQQYADDW KAGAAPVVPP ARPPRPPRPP RRDGLGVRGG 540
  541 SGSARYNQGR SRNLGSSVGL HAPRVFILLP SALTLLGLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle