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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATS1_RAT
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPEVPLGSG KLKPCSDMGD IQRAAKFRSS QSAHMLLLLL ASITMLLCVR GAHGRPTEED  60
   61 EELVLPSLER ARGHDSTTLL RLDAFGQQLH LKLQPDSGFL APGFTLQTVG RSPGSEAQHL 120
  121 DPTGDLAHCF YSGTVNGDPS SAAALSLCEG VRGAFYLQGE EFFIQPAPAV ATERLVPAEP 180
  181 KEESIAPPRF HILRRRRRGS GGAKCGVMDE ETLPTSNSGR ESQNTPDQWP LRNPTPQGAG 240
  241 KPTGPGSIRK KRFVSSPRYV ETMLVADQSM ADFHGSGLKH YLLTLFSVAA RFYKHPSIRN 300
  301 SISLVVVKIL VIYEEQKGPE VTSNAALTLR NFCSWQKQHN SPSDRDPEHY DTAILFTRQD 360
  361 LCGSHTCDTL GMADVGTVCD PSRSCSVIED DGLQAAFTTA HELGHVFNMP HDDAKHCASF 420
  421 NGVSGDSHLM ASMLSSLDHS QPWSPCSAYM VTSFLDNGHG ECLMDKPQNP IKLPSDLPGT 480
  481 LYDANRQCQF TFGEESTHCP DAASTCSTLW CTGTSGGLLV CQTKHFPWAD GTSCGEGKWC 540
  541 VSGKCVNKTD MKHFATPVHG SWGPWGPWGD CSRTCGGGVQ YTMRECDNPV PKNGGKYCEG 600
  601 KRVRYRSCNI EDCPDNNGKT FREEQCEAHN EFSKASFGNE PTVEWTPKYA GVSPKDRCKL 660
  661 TCEAKGIGYF FVLQPKVVDG TPCSPDSTSV CVQGQCVKAG CDRIIDSKKK FDKCGVCGGN 720
  721 GSTCKKISGT VTSTRPGYHD IVTIPAGATN IEVKHRNPRG SRNNGSFLAI RAADGTYILN 780
  781 GNFTLSTLEQ DLTYKGTVLR YSGSSAALER IRSFSPLKEP LTIQVLMVGH ALRPKIKYTY 840
  841 FMKKKTEPFN AIPTFSEWVI EEWGECSKTC GSGWQRRVVE CRDINGHPAS ECAKEVKPAS 900
  901 TRPCADLPCP RWQVGDWSPC SKTCGKGYKK RTLKCLSHDG GVLSNESCDP LKKPKHYIDF 960
  961 CILTQCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle