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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LTBP1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAWLRWGL LLWAGLLAWS AHGRVRRITY VVRPGPGLPA GTLPLAGPPR TFNVALDARY  60
   61 SRSSTATSSR SLAGPPAERT RRTSQPGGAA LPGLRSPLPP EPARPGAPSR QLHSKAGAQT 120
  121 AVTRFAKHGR QVVRSKVQQD TQSSGGSRLQ VQQKQQLQGI NVCGGQCCHG WSKAPGSQRC 180
  181 TKPSCVPPCQ NGGMCLRPQF CVCKPGTKGK ACEITAAQDT MSPVFGGQNP GSSWVPPEPA 240
  241 AKRTSTKKAD TLPRVSPVAQ MTLTLKPKPS MGLSQQIHSQ VAPLSSQNVM IRHGQTQEYV 300
  301 LKPKYFPAPK VVSGEQSTEG SFSLRYGQEQ GTAPFQVSNH TGRIKVVFTP SICKVTCTKG 360
  361 NCHNSCQKGN TTTLISENGH AADTLTATNF RVVICHLPCM NGGQCSSRDK CQCPPNFTGK 420
  421 LCQIPVLGAS MPKLYQHAQQ PGKALGSHVI HSTHTLPLTM TNQQGVKVKF PPNIVNIHVK 480
  481 HPPEASVQIH QVSRIDGPVG QRVKEVQPGQ SQVSYQGLPV QKTQTVHSTY SHQQVIPHVY 540
  541 PVAAKTQLGR CFQETIGSQC GKALPGLSKQ EDCCGTVGTS WGFNKCQKCP KKQSYHGYTQ 600
  601 MMECLQGYKR VNNTFCQDIN ECQLQGVCPN GECLNTMGSY RCSCKMGFGP DPTFSSCVPD 660
  661 PPMISEEKGP CYRLVSPGRQ CMHPLSVHLT KQICCCSVGK AWGPQCEKCP LPGTAAFKEI 720
  721 CPGGMGYTVS GIHRRRPIHQ HIGKEAVFVK PKNTQPVAKS THPPPLPAKE EPVEALTSSR 780
  781 EHGPGVAEPE VVTAPPEKEI PSLDQEKTRL EPGQPQLSPG VSTIHLHPQF PVVVEKTSPP 840
  841 VPVEVAPEGS TSSASQVIAP TQVTEINECT VNPDICGAGH CINLPVRYTC ICYEGYKFSE 900
  901 QQRKCIDIDE CAQAQHLCSQ GRCENTEGSF LCICPAGFIA SEEGSNCIDV DECLRPDVCR 960
  961 DGRCINTAGA FRCEYCDSGY RMSRRGHCED IDECLTPSTC PEEQCVNSPG SYQCVPCTEG1020
 1021 FRGWNGQCLD VDECLQPKVC TNGSCTNLEG SYMCSCHKGY SPTPDHRHCQ DIDECQQGNL1080
 1081 CMNGQCKNTD GSFRCTCGQG YQLSAAKDQC EDIDECEHRH LCSHGQCRNT EGSFQCLCNQ1140
 1141 GYRASVLGDH CEDINECLED SSVCQGGDCI NTAGSYDCTC PDGLQLNDNK GCQDINECAQ1200
 1201 PGLCAPHGEC LNTQGSFHCV CEQGFSISAD GRTCEDIDEC VNNTVCDSHG FCDNTAGSFR1260
 1261 CLCYQGFQAP QDGQGCVDVN ECELLSGVCG EAFCENVEGS FLCVCADENQ EYSPMTGQCR1320
 1321 SRATEDSGVD RQPKEEKKEC YYNLNDASLC DNVLAPNVTK QECCCTSGAG WGDNCEIFPC1380
 1381 PVQGTAEFSE MCPRGKGFVP AGESSYETGG ENYKDADECL LFGEEICKNG YCLNTQPGYE1440
 1441 CYCKEGTYYD PVKLQCFDMD ECQDPNSCID GQCVNTEGSY NCFCTHPMVL DASEKRCVQP1500
 1501 TESNEQIEET DVYQDLCWEH LSEEYVCSRP LVGKQTTYTE CCCLYGEAWG MQCALCPMKD1560
 1561 SDDYAQLCNI PVTGRRRPYG RDALVDFSEQ YGPETDPYFI QDRFLNSFEE LQAEECGILN1620
 1621 GCENGRCVRV QEGYTCDCFD GYHLDMAKMT CVDVNECSEL NNRMSLCKNA KCINTEGSYK1680
 1681 CVCLPGYVPS DKPNYCTPLN TALNLDKDSD LE

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