YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21245116, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHNVSKGVV YSDTALKGQD GDREGMWVGA GGALAPNTSS LFPPEPPGAS SNIIPVYCAL  60
   61 LATVVLGLLA YVAFKCWRSR KQRQQLAKAR TVELGDPDRD QRHGDSSVFV DSPHGLEPCI 120
  121 PSQGPHADLG CRLYLHIPQQ QQEEVQRLLI LGEPAKGWRG LAGQLGYQAE AVETMACDQD 180
  181 PAYALLRDWA AQEGSGATLR VLEDALTAIG REDVVQVLSS PAEGCSVV

Type	Start	End	Confidence
Non-Cytoplasmic	1	52	0.53
Transmembrane Helix	53	74	0.95
Cytoplasmic	75	228	0.91