YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OBRG_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVKALVAL SFSGAIGLTF LMLGCALEDY GVYWPLFVLI FYVISPIPYF IAKRVTYDSD  60
   61 ATSSACRELA YFFTTGIVVS AFGFPVILAR VAVIKWGACG LVLAGNAVIF LTIQGFFLVF 120
  121 GRGDDFSWEQ W

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	27	0.92
Non-Cytoplasmic	28	31	0.78
Transmembrane Helix	32	52	0.90
Cytoplasmic	53	68	0.81
Transmembrane Helix	69	92	0.88
Non-Cytoplasmic	93	97	0.65
Transmembrane Helix	98	121	0.88
Cytoplasmic	122	131	0.83