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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TAOK2_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGGRAGSL KDPDVAELFF KDDPEKLFSD LREIGHGSFG AVYFARDVRN SEVVAIKKMS  60
   61 YSGKQSNEKW QDIIKEVRFL QKLRHPNTIQ YRGCYLREHT AWLVMEYCLG SASDLLEVHK 120
  121 KPLQEVEIAA VTHGALQGLA YLHSHNMIHR DVKAGNILLS EPGLVKLGDF GSASIMAPAN 180
  181 SFVGTPYWMA PEVILAMDEG QYDGKVDVWS LGITCIELAE RKPPLFNMNA MSALYHIAQN 240
  241 ESPALQSGHW SEYFRNFVDS CLQKIPQDRP TSEVLLKHRF VLRERPPTVI MDLIQRTKDA 300
  301 VRELDNLQYR KMKKILFQEA PNGPGAEAPE EEEEAEPYMH RAGTLTSLES SHSVPSMSIS 360
  361 ASSQSSSVNS LADASDNEEE EEEEEEEEEE EEEEGPESRE MAMMQEGEHT VTSHSSIIHR 420
  421 LPGSDNLYDD PYQPEMTPGP LQPPAAPPTS TSSSSARRRA YCRNRDHFAT IRTASLVSRQ 480
  481 IQEHEQDSAL REQLSGYKRM RRQHQKQLLA LESRLRGERE EHSGRLQREL EAQRAGFGTE 540
  541 AEKLARRHQA IGEKEARAAQ AEERKFQQHI LGQQKKELAA LLEAQKRTYK LRKEQLKEEL 600
  601 QENPSTPKRE KAEWLLRQKE QLQQCQAEEE AGLLRRQRQY FELQCRQYKR KMLLARHSLD 660
  661 QDLLREDLNK KQTQKDLECA LLLRQHEATR ELELRQLQAV QRTRAELTRL QHQTELGNQL 720
  721 EYNKRREQEL RQKHAAQVRQ QPKSLKVRAG QLPMGLPATG ALGPLSTGTL SEEQPCSSGQ 780
  781 EAILGQRMLG EEEEAVPERM ILGKEGTTLE PEEQRILGEE MGTFSSSPQK HRSLVNEEDW 840
  841 DISKEMKESR VPSLASQERN IIGQEEAGAW NLWEKEHGNL VDMEFKLGWV QGPVLTPVPE 900
  901 EEEEEEEEGG APIGTPRDPG DGCPSPDIPP EPPPSHLRQY PASQLPGFLS HGLLTGLSFA 960
  961 VGSSSGLLPL LLLLLLPLLA AQGGGGLQAA LLALEVGLVG LGASYLFLCT ALHLPPSLFL1020
 1021 LLAQGTALGA VLSLSWRRGL MGVPLGLGAA WLLAWPSLAL PLAAMAAGGK WVRQQGPQMR1080
 1081 RGISRLWLRV LLRLSPMVFR ALQGCAAVGD RGLFALYPKT NKNGFRSRLP VPWPRQGNPR1140
 1141 TTQHPLALLA RVWALCKGWN WRLARASHRL ASCLPPWAVH ILASWGLLKG ERPSRIPRLL1200
 1201 PRSQRRLGLS ASRQLPPGTV AGRRSQTRRA LPPWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle