YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VAMP8_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASGSAGND RVRNLQSEVE GVKNIMTQNV ERILARGENL DHLRNKTEDL EATSEHFKTT  60
   61 SQKVARKFWW KNVKMIVIIC VIVLIILILI ILFATGTIPT

Type	Start	End	Confidence
Cytoplasmic	1	74	0.98
Transmembrane Helix	75	96	0.94
Non-Cytoplasmic	97	100	0.80