YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGRP1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFAWAPFPA LLGLADSCCF VVPRSEWKAL PSECSKGLKK PVRYVVISHT AGSFCSSPDS  60
   61 CEQQARNVQL YQMKQLGWCD VAYNFLIGED GHVYEGRGWT IKGDHTGPIW NPMSIGITFM 120
  121 GDYSHRVPAK RALRAALNLL KCGVSEGFLR SNYEVKGHRD VQSTLSPGDQ LYEIIQSWDH 180
  181 YRE

Type	Start	End	Confidence
Signal Peptide	1	17	0.88
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	183	0.98