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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CANT1_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIQPFDQRE WNEPMHSLRI SVGGLPVLAS MTKATDPRFR PRWRVILTSF VGAALLWLLY  60
   61 SHHQTPVSGR PPIHNAHNWR LRQERISQYN DTYPLSPPQR TPGGIRYRIA VIADLDTGSK 120
  121 AQEENTWFSY LKKGYLTLSD SGDRVSVEWD KDRGVLESHL AEKGRGMELS DLIVFNGKLY 180
  181 SVDDRTGVIY QIEGTKAVPW VILSDGDGAV EKGFKAEWLA VKDEHLYVGG LGKEWTTTTG 240
  241 EVVNENPEWV KVVGHRGSVE HENWVSSYNA LRAAAGIQPP GYLIHESACW SDTLQRWFFL 300
  301 PRRASHERYS EREDERKGSN LLLSAAQDFR DISVRQVGAL VPTHGFSSFK FIPNTDDQII 360
  361 VALKSEEDNG RIATYVMAFT LDGRFLLPET KIGSVKYEGI EFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle