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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CK5P1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPLQRVFRA QRLSAPLTSM CWVLLRTFRA HNSTSCPDPE GKSSEGVQKD FSSRLATGPT  60
   61 FQHFLRSASV PQEKPSSPEV EDPPPYLSGD ELLGRQRKVY LETYGCQMNV NDTEIAWSIL 120
  121 QKSGYLRTSN LQEADVILLV TCSIREKAEQ TIWNRLHQLK VLKAKRPRSR VPLRIGILGC 180
  181 MAERLKGEIL NREKMVDLLA GPDAYRDLPR LLAVVESGQQ AANVLLSLDE TYADIMPVQT 240
  241 SPSATSAFVS IMRGCDNMCS YCIVPFTRGR ERSRPVASIL DEVRKLSEQG LKEVTLLGQN 300
  301 VNSFRDNSEV QFSSTGSANL SRGFTTNYKP KQGGLRFSHL LDQVSRIDPE MRIRFTSPHP 360
  361 KDFPDEVLQL IRERHNICKQ IHLPAQSGSS RVLEAMRRGY SREAYVALVH HIREAIPGVG 420
  421 LSSDFITGFC GETEDDHLQT VSLLREVQYN TGFLFAYSMR QKTRAYHRLK DDVPEEVKLR 480
  481 RLEELITVFR EEASKVNATS VGCTQLVLVE GFSKRSTTDL CGRNDANLKV IFPDAEVEDI 540
  541 TDPGLKVRAQ PGDYVLVKII SASSQTLKGH ILCRTTMKDS SMNCLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle