YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12831207, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPKVLLMLL NMFLALQWRV GPHIKLENKP PAQDKVVFGP QPQPVPQPLI PPESPAGDDV  60
   61 VFDSQPQPQS ESPGHDDVFS SQPQPLPQPQ PLPEPQPLPE PEPQPQPQPQ PQPQPQPLAG 120
  121 RQPLPQPLPW PLPQPQPEPE PQPEPQPEPQ PEPQPEPQPE PQPEPQPEPQ PQPQPLAGRQ 180
  181 PLPWPLPLPL PEPQPDPQPD PQPEPQPEPQ PEPQPQPQTP GQVQAGRQPR PKPQPDPHPH 240
  241 PQPEPQPEPR LHPFHRLRLR PHPYPEPHPG PQPEPEPEPE PEPQPEPQPE PQPEPQPEPE 300
  301 PQPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPQPEPEPE PEPEPEPEPE 360
  361 PEPEPEPQPE PQPEPEPEPE PQPEPQPEPE PEPEPEPEPE PEPEPEPQPE PQPEPEPQPE 420
  421 PQPDPEPQPE PGPEPGPEPE PEPQLEPQPE PEPEPQPEPE SELDLEPEPE PQPLPEPQPE 480
  481 PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE PEPELELEPQ SQLEPQPSGK KLPARETELT 540
  541 ADHTTERPRG KLTRASQILN TILSNYDHKL RPSIGEKPTV VTVKVFVNSL GPISILDMEY 600
  601 SIDIIFYQTW YDERLRYNDT FETLILHGNV VSQLWIPDTF FRNSKRTQEY DITIPNQMAL 660
  661 IHKDGKVLYT VRMTIDARCS LHMLNFPMDS HSCPLSFSSF SYDEHEMIYK WENFKLKIDA 720
  721 KNTWKLLEFD FTGVNNKTEI ISTPVGDFMV MTFFFNVSRR FGFIVFQNYI PSSVTTMLSW 780
  781 VSFWIKIEAA AARASVGVSS VLTMATLGTF SRKNFPRVSY LTALDFYIAI CFVLCFCTLL 840
  841 EFTVLNFLTY NNIERQASPK FYQFPTNSRA NARTRARART RARARARARQ QQEVFVCEIV 900
  901 TYEENAEEGY QWSPRSRRPQ CPWRRCGRSY VCFRVLRKYF CMVPGCEGNS WQRGRICIHV 960
  961 YRLDNYSRVL FPITFFFFNV VYWVICLNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle