YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM21_RAT
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICAFLRVVR HAEKLHGSLG RQLLLPHFVL TKACLKTQPL RWGLREQKKT VQPRTVLGFT  60
   61 QKTFWTQGPD PRKAKEDSSK QVSINRNQRE ETGVSTSQKV KEAGRDVTYL IVVLFGVSIT 120
  121 GSLLYTIFKE LFSSSSPNII YGKALGKCRT HPEVISVFGE PVKGYGEMSR RGRRQHVSFT 180
  181 EYANNGLKRI RVKFYIEGSE PGKQGTVHAE VEENPRSGQF DFRYIFVDVA PKRSIVVEDN 240
  241 RFQQS

Type	Start	End	Confidence
Cytoplasmic	1	106	0.96
Transmembrane Helix	107	128	0.92
Non-Cytoplasmic	129	245	0.99