YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDN_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWHFPFFIL TTVTLSSVYS QLNSLSLEEL GSDTGIQVFN QIIKSQPHEN VVISPHGIAS  60
   61 ILGMLQLGAD GRTKKQLSTV MRYNVNGVGK VLKKINKAIV SKKNKDIVTV ANAVFVRNGF 120
  121 KVEVPFAARN KEVFQCEVQS VNFQDPASAC DAINFWVKNE TRGMIDNLLS PNLIDSALTK 180
  181 LVLVNAVYFK GLWKSRFQPE NTKKRTFVAG DGKSYQVPML AQLSVFRSGS TKTPNGLWYN 240
  241 FIELPYHGES ISMLIALPTE SSTPLSAIIP HISTKTINSW MNTMVPKRMQ LVLPKFTALA 300
  301 QTDLKEPLKA LGITEMFEPS KANFAKITRS ESLHVSHILQ KAKIEVSEDG TKAAVVTTAI 360
  361 LIARSSPPWF IVDRPFLFCI RHNPTGAILF LGQVNKP

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	397	0.99