YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2RX5_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQAAWKGFV LSLFDYKTAK FVVAKSKKVG LLYRVLQLII LLYLLIWVFL IKKSYQDIDT  60
   61 SLQSAVVTKV KGVAYTNTTM LGERLWDVAD FVIPSQGENV FFVVTNLIVT PNQRQGICAE 120
  121 REGIPDGECS EDDDCHAGES VVAGHGLKTG RCLRVGNSTR GTCEIFAWCP VETKSMPTDP 180
  181 LLKDAESFTI SIKNFIRFPK FNFSKANVLE TDNKHFLKTC HFSSTNLYCP IFRLGSIVRW 240
  241 AGADFQDIAL KGGVIGIYIE WDCDLDKAAS KCNPHYYFNR LDNKHTHSIS SGYNFRFARY 300
  301 YRDPNGVEFR DLMKAYGIRF DVIVNGKAGK FSIIPTVINI GSGLALMGAG AFFCDLVLIY 360
  361 LIRKSEFYRD KKFEKVRGQK EDANVEVEAN EMEQERPEDE PLERVRQDEQ SQELAQSGRK 420
  421 QNSNCQVLLE PARFGLRENA IVNVKQSQIL HPVKT

Type	Start	End	Confidence
Cytoplasmic	1	29	0.95
Transmembrane Helix	30	51	0.90
Non-Cytoplasmic	52	339	0.98
Transmembrane Helix	340	362	0.84
Cytoplasmic	363	455	0.89