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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP2A3_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASGLLLVA SVAFLSVLVL MSVWKQRKLS GKLPPGPTPL PFIGNYLQLN TEKMYSSLMK  60
   61 ISQRYGPVFT IHLGPRRVVV LCGQEAVKEA LVDQAEEFSG RGEQATFDWL FKGYGVAFSS 120
  121 GERAKQLRRF SIATLRDFGV GKRGIEERIQ EEAGFLIESF RKTNGALIDP TFYLSRTVSN 180
  181 VISSIVFGDR FDYEDKEFLS LLRMMLGSFQ FTATSTGQLY EMFSSVMKHL PGPQQQAFKE 240
  241 LQGLEDFITK KVEQNQRTLD PNSPRDFIDS FLIRMLEEKK NPNTEFYMKN LVLTTLNLFF 300
  301 AGTETVSTTL RYGFLLLMKH PDIEAKVHEE IDRVIGRNRQ AKYEDRMKMP YTEAVIHEIQ 360
  361 RFADMIPMGL ARRVTKDTKF REFLLPKGTE VFPMLGSVLK DPKFFSNPND FNPKHFLDDK 420
  421 GQFKKSDAFV PFSIGKRYCF GEGLARMELF LFLTNIMQNF CFKSPQAPQD IDVSPRLVGF 480
  481 ATIPPNYTMS FLSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle