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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7109287, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGAWVLLLL GFRLQLSLSV IPVEEENPAF WNQKAADALN VAKKLQPIQT SAKNLIIFLG  60
   61 DGMGVPTVTA TRILKGQLEG NLGPETPLAM DHFPYMALSK TYSVDRQVPD SASTATAYLC 120
  121 GVKTNYKTIG VSAAARFDQC NTTFGNEVLS VMYRAKKAGK SVGVVTTTRV QHASPAGTYV 180
  181 HTVNRNWYGD ADMPASALQE GCKDIATQLI SNMDINVILG GGRKYMFPAG TPDPEYPNDV 240
  241 NETGTRLDGK NLVQEWLSKH QGSQYVWNRQ ELIQKSLDPS VTYLMGLFEP VDTKFEIQRD 300
  301 PLMDPSLKDM TEAALHVLSR NPKGFYLFVE GGRIDRGHHL GTAYLALTEA VMLDSAIERA 360
  361 SQLTSEQDTL TIVTADHSHV FSFGGYTLRG TSIFGLAPLN ALDGKPYTSI LYGNGPGYVG 420
  421 TGERPNVTDA ESHDPSYQQQ AAVPVKSETH GGEDVAIFAR GPQAHLLHGV QEQNYIAHVM 480
  481 AFAGCLEPYT DCGLAPPADE NRPTTPVQNS TTTTTTTTTT TTTTTTTRVQ NSASSLGPAT 540
  541 GPLALALLAK ALMLLLGAPA DF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle