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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALS_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRTGGPAL VVLLAFWVAL GPCHLQGTDP GASADAEGPQ CPVACTCSHD DYTDELSVFC  60
   61 SSKNLTHLPD DIPVSTRALW LDGNNLSSIP SAAFQNLSSL DFLNLQGSWL RSLEPQALLG 120
  121 LQNLYYLHLE RNRLRNLAVG LFTHTPSLAS LSLSSNLLGR LEEGLFQGLS HLWDLNLGWN 180
  181 SLVVLPDTVF QGLGNLHELV LAGNKLTYLQ PALFCGLGEL RELDLSRNAL RSVKANVFVH 240
  241 LPRLQKLYLD RNLITAVAPG AFLGMKALRW LDLSHNRVAG LMEDTFPGLL GLHVLRLAHN 300
  301 AIASLRPRTF KDLHFLEELQ LGHNRIRQLG ERTFEGLGQL EVLTLNDNQI TEVRVGAFSG 360
  361 LFNVAVMNLS GNCLRSLPER VFQGLDKLHS LHLEHSCLGH VRLHTFAGLS GLRRLFLRDN 420
  421 SISSIEEQSL AGLSELLELD LTTNRLTHLP RQLFQGLGHL EYLLLSYNQL TTLSAEVLGP 480
  481 LQRAFWLDIS HNHLETLAEG LFSSLGRVRY LSLRNNSLQT FSPQPGLERL WLDANPWDCS 540
  541 CPLKALRDFA LQNPGVVPRF VQTVCEGDDC QPVYTYNNIT CAGPANVSGL DLRDVSETHF 600
  601 VHC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle