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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GP156_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEINCSEF CDSFPGQELD RRPLHDLCKT TITDSQHGSA DISPLSPALL GVIWTFLSCG  60
   61 LLLVLFFLAF TIRCRKNRIV KMSSPNLNIV TLLGSCLTYS SAYLFGIQDA LVGSSVEALI 120
  121 QTRLSLLCIG TTLVFGPILG KSWRLYKVFT QRVPDKRVII KDLQLLGLVA ALVVADVILL 180
  181 VTWVLTDPIQ CLQILGVSMK VTGRDVSCSL TNTHFCASRY SDVWIALVLG CKGLLLLYGA 240
  241 YLAGLTNHVS SPPVNQSLTI MVGVNLLLLT AGLLFVVTRY LHSWPNLVFG LTSGGIFVCT 300
  301 TTVNCCVFLP QLRQRKAFEG ENQTIRHMAK YFSTPSKTFR SKFDEDQSCH LRDEXSCMER 360
  361 LLTEKNAVIE SLQEQVSNAK EKLVKLMSAE CALDSPEWAV PAAASAGGPA ECXATSEKES 420
  421 GAAAEDSLPA SAASQHMQGP GASRRDXSPS PDQKYDMPLK QFCDHLDMGC SQKPKAEQSE 480
  481 GPERGNQEPM APGQSLMTDG VACEPHRPRQ NSEVLPERLP RVSSVVREKL QEVLQELDLG 540
  541 TEAPLSPLPC PQQPWKSNTS GSPQKLSPSK LGFSPYVVRR RRAAQRARSR IPGSVGLKMG 600
  601 HQANNTVSGS QNGLIVQNRD SPRLDHHNAR SKEPRSSSVK PSPISAPHQR RGSLEGSKQC 660
  661 ETEPQEARGY SVAFPRQPSA SAPAQSSTAP CLSSXPALPR QRQPLPLLSP GCPSLSSGCY 720
  721 NLDSESSSSD EFFCRCHRPY CEICFQSSLD SNDSDTSDSD LEQTSGLASW EKLLARSKPV 780
  781 VNFKDDLKPT LV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle