YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21426807, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLARLPGWL YVVACGLLLL LQHVHGQDSA SPIRNTHTGQ VRGSFVHVKD TKSGIHTFLG  60
   61 IPFAKPPVGP LRFAPPEDPE PWSGVRDATS QPAMCLQTDI MNLDGIKEMK LTVHPTPMSE 120
  121 DCLYLNIYTP AHAREGSNLP VMVWIHGGGL VLGSASMNDA STLAATEEIV IVSIQYRLGV 180
  181 LGFFSTGDQN ARGNWGYLDQ VAALRWVQQN IAYFGGNHGK VTIFGGSAGG TSVSSHVVSP 240
  241 MSKGLFHGAI MQSGVALLPD LISDKSEVVY KTVANLSGCE APDSEALIRC LRAKSKQEIL 300
  301 AINQVFKMIP GVVDGKFLPK HPQELLASGD FHPVPSIIGI NTDECGWGIP VFLGLDHIIK 360
  361 KITRETLPTV LKSTAAQMML PPECIDLIME EYMGDTENPE TLQEQFRHML GDFMFVIPAL 420
  421 QVAHFQRSQA PVYFYEFQHL PSFIKQVRPS HVKADHGDDI LFVFGSYLWG MTFDLTEEEE 480
  481 LLKRRVMKYW ANFARTGNPN GEDLPHWPVL DHDEQYLQLN TQPAVGRALK ARRLQFWTKT 540
  541 LPQKIQELKG SQSKHAEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle