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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22073956
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CCLHLCSEER RXPGSCLAMD TASSPPNAER KRAGWGRLLG ARRGSAGLAK KCPFSLELAE  60
   61 GGPTGGTVYA PIAPTGAPGL APPMSPPVSP VPAPADLGPR PREIVLVVFF GTEYVVRLWS 120
  121 AGCRSKYVGI WGRLRFARKP ISIIDLIVVV ASMVVLCVGS KGQVFATSAI RGIRFLQILR 180
  181 MLHVDRQGGT WRLLGSVVFI HRQELITTLY IGFLGLIFSS YFVYLAEKDA VNESGRIEFG 240
  241 SYADALWWGV VTVTTIGYGD KVPQTWVGKT IASCFSVFAI SFFALPAGIL GSGFALKVQQ 300
  301 KQRQKHFNRQ IPAAASLIQT AWRCYAAENP DSSTWKIYVR KPARSHTLLS PSPKPKKSVM 360
  361 VKKKKFKLDK DNGLSPGEKI FNVPHITCDP PEDRRPDHFS IDGYDSSVRK SPTLLEVSTP 420
  421 HFLRTNSFAE DLDLEGETLL TPITHVSQLR DHHRATIKVI RRMQYFVAKK KFQQARKPYD 480
  481 VRDVIEQYSQ GHLNLMVRIK ELQRRLDQSI GKPSLFIPIS EKSKDRGSNT IGARLNRVED 540
  541 KVTQLDQRLV IITDMLHQLL SLQQGGPTCN NRSQVVASDE GGSINPELFL PSNSLPTYEQ 600
  601 LTVPQTGPDE GS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle