YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22651450
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLGRATLAL LLLVPCVVRA VEPISLGLAL AGVLTGYISY PRLYCLFAEC CGQKRSLSRE  60
   61 ALQKDLDNKL FGQHLAKRVI LNAVSGFLSN PKPKKPLTLS LHGWTGTGKN FASKIIAENI 120
  121 YEGGLNSDYV HLFVATLHFP HASNITLYKD QLQMWIRGNV SACARSIFIF DEMDKMHASL 180
  181 IDAIKPFLDY YDVVDEVSYQ KAIFIFLSNA GAERITDVAL DFWRSGKQRE EIKLRDMEHA 240
  241 LAVSVFNNKN SGFWHSSLID RNLIDYFVPF LPLEYKHLKM CIRVEMQSRG YEEDEDIINK 300
  301 VAEEMTFFPK EEKVFSDKGC KTVFTKLDYY LDD

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	333	0.99