YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45271111, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLQKSTYG TIVEGQETYS VEDSGLLRIL LVGKSGCGKS ATGNSILRRP AFESRLRGQS  60
   61 VTRTSQAEMG TWEGRSFLVV DTPPIFESKI QNQDMDKDIG NCYLMCAPGP HVLLLVTQLG 120
  121 RYTVEDAMAV RMVKQIFGVG VMRYMIVLFT HKEDLADESL EEFVTHTGNL DLHRLVQECG 180
  181 RRYCAFNNKA SGEEQQGQLA ELMALVRRLE QEHEGSFHSN DLFVYTQVFL RGGYSEHQEP 240
  241 YKFYLTKVRQ EVEKQKRELE EQEGSWMAKM LCRVTSCLDW HIAVSVLLIV LGLTLLITLI 300
  301 NMYIGRWK

Type	Start	End	Confidence
Non-Cytoplasmic	1	279	0.62
Transmembrane Helix	280	304	0.87
Cytoplasmic	305	308	0.57